Medical Xpress reports on a study which managed to make a reconstruction of the original SARS-CoV-2 genome that infected patient zero.
No genome could have possibly been sampled in the early days when the virus made the jump to humans while the world was still unaware of the disease; thus, it has to be reconstructed by working backwards through all the mutations recorded. This study was led by Sudhir Kumar, director of the Institute for Genomics and Evolutionary Medicine, Temple University, and sifted through 30 000 complete SARS-CoV-2 genomes, searching for what they called the “progenitor genome”.
Previous attempts to reach the same goal because the focus was to build an evolutionary tree, said Kumar. “This coronavirus evolves too slow, the number of genomes to analyze is too large, and the data quality of genomes is highly variable. I immediately saw parallels between the properties of these genetic data from coronavirus with the genetic data from the clonal spread of another nefarious disease, cancer,” Kumar said.
The research has already yielded intriguing insights; a protein that made the virus more infectious apparently appeared early on, before many of the other mutations that took place, but this protein was not in the progenitor genome.
